2009

Dhananjay Thakur, Shuang Deng, Thierno Baldet, and Jessica Winter
"pH sensitive CdS-iron oxide fluorescent-magnetic nanocomposites."
Nanotechnology 20, 485601 (2009).

Rohit Tiwari, Kiran Mahasenan, Ryan Pavlovicz, Chenglong Li, and Werner Tjarks
"Carborane clusters in computational drug design: a comparative docking evaluation using AutoDock, FlexX, Glide, and Surflex."
Journal of chemical information and modeling 49, 1581-9 (2009).

Zhongfa Liu, Shujun Liu, Zhiliang Xie, Ryan E Pavlovicz, Jiejun Wu, Ping Chen, Josephine Aimiuwu, Jiuxia Pang, Deepak Bhasin, Paolo Neviani, James R Fuchs, Christoph Plass, Pui-Kai Li, Chenglong Li, Tim H-M Huang, Lai-Chu Wu, Laura Rush, Hongyan Wang, Danilo Perrotti, Guido Marcucci, and Kenneth K Chan
"Modulation of DNA methylation by a sesquiterpene lactone parthenolide."
J. Pharmacol. Exp. Ther. 329, 505-14 (2009).

Bin Liu, Arun K Tewari, Liwen Zhang, Kari B Green-Church, Jay L Zweier, Yeong-Renn Chen, and Guanglong He
"Proteomic analysis of protein tyrosine nitration after ischemia reperfusion injury Mitochondria as the major target."
Biochim. Biophys. Acta 1794, 476-85 (2009).

Tatiana F González-Cestari, Brandon J Henderson, Ryan E Pavlovicz, Susan B McKay, Raed A El-Hajj, Aravinda B Pulipaka, Crina M Orac, Damon D Reed, R Thomas Boyd, Michael X Zhu, Chenglong Li, Stephen C Bergmeier, and Dennis B McKay
"Effect of novel negative allosteric modulators of neuronal nicotinic receptors on cells expressing native and recombinant nicotinic receptors implications for drug discovery."
J. Pharmacol. Exp. Ther. 328, 504-15 (2009).

Zhongfa Liu, Zhiliang Xie, William Jones, Ryan E Pavlovicz, Shujun Liu, Jianhua Yu, Pui-kai Li, Jiayuh Lin, Jame R Fuchs, Guido Marcucci, Chenglong Li, and Kenneth K Chan
"Curcumin is a potent DNA hypomethylation agent."
Bioorg. Med. Chem. Lett. 19, 706-9 (2009).

Angela R Blissett, Derek Garbellini, Edward P Calomeni, Cosmin Mihai, Terry S Elton, and Gunjan Agarwal
"Regulation of collagen fibrillogenesis by cell-surface expression of kinase dead DDR2."
J. Mol. Biol. 385, 902-11 (2009).

B Fuh, M Sobo, L Cen, D Josiah, B Hutzen, K Cisek, D Bhasin, N Regan, L Lin, C Chan, H Caldas, S DeAngelis, C Li, P-K Li, and J Lin
"LLL-3 inhibits STAT3 activity, suppresses glioblastoma cell growth and prolongs survival in a mouse glioblastoma model."
Br. J. Cancer 100, 106-12 (2009).

Emilia Iscru, Yelda Serinagaoglu, Karl Schilling, Jinbin Tian, Stephanie L Bowers-Kidder, Rui Zhang, James I Morgan, A Courtney DeVries, Randy J Nelson, Michael X Zhu, and John Oberdick
"Sensorimotor enhancement in mouse mutants lacking the Purkinje cell-specific Gi/o modulator, Pcp2L7."
Mol. Cell. Neurosci. 40, 62-75 (2009).

Chris T Middleton, Kimberly de La Harpe, Charlene Su, Yu Kay Law, Carlos E Crespo-Hernández, and Bern Kohler
"DNA excited-state dynamics: from single bases to the double helix."
Annual review of physical chemistry 60, 217-39 (2009).

2008

Dmitry Terentyev, Inna Györke, Andriy E Belevych, Radmila Terentyeva, Arun Sridhar, Yoshinori Nishijima, Esperanza Carcache de Blanco, Savita Khanna, Chandan K Sen, Arturo J Cardounel, Cynthia A Carnes, and Sandor Györke
"Redox modification of ryanodine receptors contributes to sarcoplasmic reticulum Ca2 leak in chronic heart failure."
Circ. Res. 103, 1466-72 (2008).

Carlos D Amero, William P Boomershine, Yiren Xu, and Mark Foster
"Solution structure of Pyrococcus furiosus RPP21, a component of the archaeal RNase P holoenzyme, and interactions with its RPP29 protein partner."
Biochemistry 47, 11704-10 (2008).

Yi Xu, Bin Liu, Jay L Zweier, and Guanglong He
"Formation of hydrogen peroxide and reduction of peroxynitrite via dismutation of superoxide at reperfusion enhances myocardial blood flow and oxygen consumption in postischemic mouse heart."
J. Pharmacol. Exp. Ther. 327, 402-10 (2008).

Raquel M Raices, Yashaswini Kannan, Anasuya Sarkar, Vedavathi Bellamkonda-Athmaram, and Mark D Wewers
"A synergistic role for IL-1beta and TNFalpha in monocyte-derived IFNgamma inducing activity."
Cytokine 44, 234-41 (2008).

Xianhua Cao, Guang Jia, Tao Zhang, Ming Yang, Bing Wang, Peter A Wassenaar, Hao Cheng, Michael V Knopp, and Duxin Sun
"Non-invasive MRI tumor imaging and synergistic anticancer effect of HSP90 inhibitor and glycolysis inhibitor in RIP1-Tag2 transgenic pancreatic tumor model."
Cancer Chemother. Pharmacol. 62, 985-94 (2008).

Arun Sridhar, Yoshinori Nishijima, Dmitry Terentyev, Radmila Terentyeva, Rebecca Uelmen, Monica Kukielka, Ingrid M Bonilla, Gail A Robertson, Sandor Györke, George E Billman, and Cynthia A Carnes
"Repolarization abnormalities and afterdepolarizations in a canine model of sudden cardiac death."
Am. J. Physiol. Regul. Integr. Comp. Physiol. 295, R1463-72 (2008).

Georgette N Jones, Chhavy Tep, William H Towns, Georgeta Mihai, Ian D Tonks, Graham F Kay, Petra M Schmalbrock, Anat O Stemmer-Rachamimov, Sung Ok Yoon, and Lawrence S Kirschner
"Tissue-specific ablation of Prkar1a causes schwannomas by suppressing neurofibromatosis protein production."
Neoplasia 10, 1213-21 (2008).

Tennille Presley, Kaushik Vedam, Murugesan Velayutham, Jay L Zweier, and Govindasamy Ilangovan
"Activation of Hsp90-eNOS and increased NO generation attenuate respiration of hypoxia-treated endothelial cells."
Am. J. Physiol., Cell Physiol. 295, C1281-91 (2008).

Ya-Ting Kao, Chaitanya Saxena, Ting-Fang He, Lijun Guo, Lijuan Wang, Aziz Sancar, and Dongping Zhong
"Ultrafast dynamics of flavins in five redox states."
J. Am. Chem. Soc. 130, 13132-9 (2008).

Marianne M Lee, Ruisheng Jiang, Rinku Jain, Ross C Larue, Joseph Krzycki, and Michael K Chan
"Structure of Desulfitobacterium hafniense PylSc, a pyrrolysyl-tRNA synthetase."
Biochem. Biophys. Res. Commun. 374, 470-4 (2008).

Manoj S Nair and Donald H Dean
"All domains of Cry1A toxins insert into insect brush border membranes."
J. Biol. Chem. 283, 26324-31 (2008).

Guang Jia, Craig ODell, Johannes T Heverhagen, Xiangyu Yang, Jiachao Liang, Richard V Jacko, Steffen Sammet, Theodore Pellas, Patricia Cole, and Michael V Knopp
"Colorectal liver metastases: contrast agent diffusion coefficient for quantification of contrast enhancement heterogeneity at MR imaging."
Radiology 248, 901-9 (2008).

Andrew S Pederzolli, Madalina E Tivarus, Punit Agrawal, Sandra K Kostyk, Karen M Thomas, and David Q Beversdorf
"Dopaminergic modulation of semantic priming in Parkinson disease."
Cognitive and behavioral neurology official journal of the Society for Behavioral and Cognitive Neurology 21, 134-7 (2008).

Sathish Rajamani, Wolfgang D Bauer, Jayne B Robinson, John M Farrow, Everett C Pesci, Max Teplitski, Mengsheng Gao, Richard T Sayre, and Donald A Phillips
"The vitamin riboflavin and its derivative lumichrome activate the LasR bacterial quorum-sensing receptor."
Mol. Plant Microbe Interact. 21, 1184-92 (2008).

Moacir A Torres, Marcelo P Barros, Sara C G Campos, Ernani Pinto, Satish Rajamani, Richard T Sayre, and Pio Colepicolo
"Biochemical biomarkers in algae and marine pollution a review."
Ecotoxicol. Environ. Saf. 71, 1-15 (2008).

Clara E Isaza, Xuejun Zhong, Lucia E Rosas, James D White, Rita P-Y Chen, George F-C Liang, Sunney I Chan, Abhay R Satoskar, and Michael K Chan
"A proposed role for Leishmania major carboxypeptidase in peptide catabolism."
Biochem. Biophys. Res. Commun. 373, 25-9 (2008).

Haiyan Liu, Judith A Enyeart, and John J Enyeart
"ACTH inhibits bTREK-1 K channels through multiple cAMP-dependent signaling pathways."
J. Gen. Physiol. 132, 279-94 (2008).

M Judith Radin, Bethany J Holycross, Cristian Dumitrescu, Robert Kelley, and Ruth A Altschuld
"Leptin modulates the negative inotropic effect of interleukin-1beta in cardiac myocytes."
Mol. Cell. Biochem. 315, 179-84 (2008).

Guoning Hu and DeLiang Wang
"Segregation of unvoiced speech from nonspeech interference."
J. Acoust. Soc. Am. 124, 1306-19 (2008).

Subhojit Som, Lee C Potter, Rizwan Ahmad, Deepti S Vikram, and Periannan Kuppusamy
"EPR oximetry in three spatial dimensions using sparse spin distribution."
J. Magn. Reson. 193, 210-7 (2008).

Charles I Jones, Zhaosheng Han, Tennille Presley, Saradhadevi Varadharaj, Jay L Zweier, Govindasamy Ilangovan, and B Rita Alevriadou
"Endothelial cell respiration is affected by the oxygen tension during shear exposure role of mitochondrial peroxynitrite."
Am. J. Physiol., Cell Physiol. 295, C180-91 (2008).

Deepti S Vikram, Rizwan Ahmad, Ramasamy P Pandian, Sergey Petryakov, and Periannan Kuppusamy
"Evaluation of oxygen-response times of phthalocyanine-based crystalline paramagnetic spin probes for EPR oximetry."
J. Magn. Reson. 193, 127-32 (2008).

Hyun Lee, Chunhua Yuan, Andrew Hammet, Anjali Mahajan, Eric S-W Chen, Ming-Ru Wu, Mei-I Su, Jörg Heierhorst, and Ming-Daw Tsai
"Diphosphothreonine-specific interaction between an SQ/TQ cluster and an FHA domain in the Rad53-Dun1 kinase cascade."
Mol. Cell 30, 767-78 (2008).

Judith A Enyeart, Haiyan Liu, and John J Enyeart
"Curcumin inhibits bTREK-1 K channels and stimulates cortisol secretion from adrenocortical cells."
Biochem. Biophys. Res. Commun. 370, 623-8 (2008).

Marianne M Lee, Michael K Chan, and Ralf Bundschuh
"Simple is beautiful: a straightforward approach to improve the delineation of true and false positives in PSI-BLAST searches."
Bioinformatics 24, 1339-43 (2008).

Xiangyu Yang, Jiachao Liang, Johannes T Heverhagen, Guang Jia, Petra Schmalbrock, Steffen Sammet, Regina Koch, and Michael V Knopp
"Improving the pharmacokinetic parameter measurement in dynamic contrast-enhanced MRI by use of the arterial input function: theory and clinical application."
Magnetic resonance in medicine : official journal of the Society of Magnetic Resonance in Medicine / Society of Magnetic Resonance in Medicine 59, 1448-56 (2008).

Daniel F Iscru, Mirela Anghelina, Sudha Agarwal, and Gunjan Agarwal
"Changes in surface topologies of chondrocytes subjected to mechanical forces an AFM analysis."
J. Struct. Biol. 162, 397-403 (2008).

Hari B Kamadurai, Rinku Jain, and Mark P Foster
"Crystallization and structure determination of the core-binding domain of bacteriophage lambda integrase."
Acta Crystallogr. Sect. F Struct. Biol. Cryst. Commun. 64, 470-3 (2008).

Rizwan Ahmad, Deepti S Vikram, Lee C Potter, and Periannan Kuppusamy
"Estimation of mean and median pO2 values for a composite EPR spectrum."
J. Magn. Reson. 192, 269-74 (2008).

Manoj S Nair, Xinyan Sylvia Liu, and Donald H Dean
"Membrane insertion of the Bacillus thuringiensis Cry1Ab toxin single mutation in domain II block partitioning of the toxin into the brush border membrane."
Biochemistry 47, 5814-22 (2008).

Marianne M Lee, Ralf Bundschuh, and Michael K Chan
"Distant homology detection using a LEngth and STructure-based sequence Alignment Tool LESTAT."
Proteins 71, 1409-19 (2008).

Yu Kay Law, Javad Azadi, Carlos E Crespo-Hernández, Eric Olmon, and Bern Kohler
"Predicting thymine dimerization yields from molecular dynamics simulations."
Biophys. J. 94, 3590-600 (2008).

Michelle M Monasky, Kenneth D Varian, Jonathan P Davis, and Paul M L Janssen
"Dissociation of force decline from calcium decline by preload in isolated rabbit myocardium."
Pflugers Arch. 456, 267-76 (2008).

Ken-ichi Otsuguro, Jisen Tang, Yufang Tang, Rui Xiao, Marc Freichel, Volodymyr Tsvilovskyy, Shigeo Ito, Veit Flockerzi, Michael X Zhu, and Alexander V Zholos
"Isoform-specific inhibition of TRPC4 channel by phosphatidylinositol 4,5-bisphosphate."
J. Biol. Chem. 283, 10026-36 (2008).

Mark G Angelos, Ryan L Butke, Ashish R Panchal, Carlos A A Torres, Alan Blumberg, Jim E Schneider, and Sverre E Aune
"Cardiovascular response to epinephrine varies with increasing duration of cardiac arrest."
Resuscitation 77, 101-10 (2008).

Yuxia Dong, Sara R Palmer, Adnan Hasona, Shushi Nagamori, H Ronald Kaback, Ross E Dalbey, and L Jeannine Brady
"Functional overlap but lack of complete cross-complementation of Streptococcus mutans and Escherichia coli YidC orthologs."
J. Bacteriol. 190, 2458-69 (2008).

Rui Xiao, Jinbin Tian, Jisen Tang, and Michael X Zhu
"The TRPV3 mutation associated with the hairless phenotype in rodents is constitutively active."
Cell Calcium 43, 334-43 (2008).

Vadim Cherezov, Wei Liu, Jeremy P Derrick, Binquan Luan, Aleksei Aksimentiev, Vsevolod Katritch, and Martin Caffrey
"In meso crystal structure and docking simulations suggest an alternative proteoglycan binding site in the OpcA outer membrane adhesin."
Proteins 71, 24-34 (2008).

Rui Xiao, Jisen Tang, Chunbo Wang, Craig K Colton, Jinbin Tian, and Michael X Zhu
"Calcium plays a central role in the sensitization of TRPV3 channel to repetitive stimulations."
J. Biol. Chem. 283, 6162-74 (2008).

Michelle M Monasky, Kenneth D Varian, and Paul M L Janssen
"Gender comparison of contractile performance and beta-adrenergic response in isolated rat cardiac trabeculae."
J. Comp. Physiol. B, Biochem. Syst. Environ. Physiol. 178, 307-13 (2008).

Jonathan P Davis and Svetlana B Tikunova
"Ca2 exchange with troponin C and cardiac muscle dynamics."
Cardiovasc. Res. 77, 619-26 (2008).

Sharon Schreiber, Mayur Savla, Denis V Pelekhov, Daniel F Iscru, Camelia Selcu, P Chris Hammel, and Gunjan Agarwal
"Magnetic force microscopy of superparamagnetic nanoparticles."
Small 4, 270-8 (2008).

Theresa J Kannanayakal, Jerry R Mendell, and Jeff Kuret
"Casein kinase 1 alpha associates with the tau-bearing lesions of inclusion body myositis."
Neurosci. Lett. 431, 141-5 (2008).

Deepak Bhasin, Katryna Cisek, Trupti Pandharkar, Nicholas Regan, Chenglong Li, Bulbul Pandit, Jiayuh Lin, and Pui-Kai Li
"Design, synthesis, and studies of small molecule STAT3 inhibitors."
Bioorg. Med. Chem. Lett. 18, 391-5 (2008).

Mahmood Khan, Vijay Kumar Kutala, Sheik Wisel, Simi M Chacko, M Lakshmi Kuppusamy, Pawel Kwiatkowski, and Periannan Kuppusamy
"Measurement of oxygenation at the site of stem cell therapy in a murine model of myocardial infarction."
Adv. Exp. Med. Biol. 614, 45-52 (2008).

Madalina E Tivarus, Ashleigh Hillier, Petra Schmalbrock, and David Q Beversdorf
"Functional connectivity in an fMRI study of semantic and phonological processes and the effect of L-Dopa."
Brain and language 104, 42-50 (2008).

Heather L Campbell, Madalina E Tivarus, Ashleigh Hillier, and David Q Beversdorf
"Increased task difficulty results in greater impact of noradrenergic modulation of cognitive flexibility."
Pharmacol. Biochem. Behav. 88, 222-9 (2008).

Taek H You, Mi K Lee, Jeremy L Jenkins, Oscar Alzate, and Donald H Dean
"Blocking binding of Bacillus thuringiensis Cry1Aa to Bombyx mori cadherin receptor results in only a minor reduction of toxicity."
BMC Biochem. 9, 3 (2008).

Georgeta Mihai, Yvette S Nout, C Amy Tovar, Brandon A Miller, Petra Schmalbrock, Jacqueline C Bresnahan, and Michael S Beattie
"Longitudinal comparison of two severities of unilateral cervical spinal cord injury using magnetic resonance imaging in rats."
J. Neurotrauma 25, 1-18 (2008).

2007

Mingxuan Xu, Ruifeng Cao, Rui Xiao, Michael X Zhu, and Chen Gu
"The axon-dendrite targeting of Kv3 Shaw channels is determined by a targeting motif that associates with the T1 domain and ankyrin G."
J. Neurosci. 27, 14158-70 (2007).

Hari B Kamadurai and Mark P Foster
"DNA recognition via mutual-induced fit by the core-binding domain of bacteriophage lambda integrase."
Biochemistry 46, 13939-47 (2007).

Xin Li, Sanjay Jayachandran, Hiep-Hoa T Nguyen, and Michael K Chan
"Structure of the Nitrosomonas europaea Rh protein."
Proc. Natl. Acad. Sci. U.S.A. 104, 19279-84 (2007).

Luyuan Zhang, Lijuan Wang, Ya-Ting Kao, Weihong Qiu, Yi Yang, Oghaghare Okobiah, and Dongping Zhong
"Mapping hydration dynamics around a protein surface."
Proc. Natl. Acad. Sci. U.S.A. 104, 18461-6 (2007).

Anjali Mahajan, Yi Guo, Chunhua Yuan, Christopher M Weghorst, Ming-Daw Tsai, and Junan Li
"Dissection of protein-protein interaction and CDK4 inhibition in the oncogenic versus tumor suppressing functions of gankyrin and P16."
J. Mol. Biol. 373, 990-1005 (2007).

A Sridhar, D N Q da Cunha, V A Lacombe, Q Zhou, J J Fox, R L Hamlin, and C A Carnes
"The plateau outward current in canine ventricle, sensitive to 4-aminopyridine, is a constitutive contributor to ventricular repolarization."
Br. J. Pharmacol. 152, 870-9 (2007).

Véronique A Lacombe, Serge Viatchenko-Karpinski, Dmitry Terentyev, Arun Sridhar, Sitaramesh Emani, John D Bonagura, David S Feldman, Sandor Györke, and Cynthia A Carnes
"Mechanisms of impaired calcium handling underlying subclinical diastolic dysfunction in diabetes."
Am. J. Physiol. Regul. Integr. Comp. Physiol. 293, R1787-97 (2007).

Sabeeha S Merchant, Simon E Prochnik, Olivier Vallon, Elizabeth H Harris, Steven J Karpowicz, George B Witman, Astrid Terry, Asaf Salamov, Lillian K Fritz-Laylin, Laurence Maréchal-Drouard, Wallace F Marshall, Liang-Hu Qu, David R Nelson, Anton A Sanderfoot, Martin H Spalding, Vladimir V Kapitonov, Qinghu Ren, Patrick Ferris, Erika Lindquist, Harris Shapiro, Susan M Lucas, Jane Grimwood, Jeremy Schmutz, Pierre Cardol, Heriberto Cerutti, Guillaume Chanfreau, Chun-Long Chen, Valérie Cognat, Martin T Croft, Rachel Dent, Susan Dutcher, Emilio Fernández, Hideya Fukuzawa, David González-Ballester, Diego González-Halphen, Armin Hallmann, Marc Hanikenne, Michael Hippler, William Inwood, Kamel Jabbari, Ming Kalanon, Richard Kuras, Paul A Lefebvre, Stéphane D Lemaire, Alexey V Lobanov, Martin Lohr, Andrea Manuell, Iris Meier, Laurens Mets, Maria Mittag, Telsa Mittelmeier, James V Moroney, Jeffrey Moseley, Carolyn Napoli, Aurora M Nedelcu, Krishna Niyogi, Sergey V Novoselov, Ian T Paulsen, Greg Pazour, Saul Purton, Jean-Philippe Ral, Diego Mauricio Riaño-Pachón, Wayne Riekhof, Linda Rymarquis, Michael Schroda, David Stern, James Umen, Robert Willows, Nedra Wilson, Sara Lana Zimmer, Jens Allmer, Janneke Balk, Katerina Bisova, Chong-Jian Chen, Marek Elias, Karla Gendler, Charles Hauser, Mary Rose Lamb, Heidi Ledford, Joanne C Long, Jun Minagawa, M Dudley Page, Junmin Pan, Wirulda Pootakham, Sanja Roje, Annkatrin Rose, Eric Stahlberg, Aimee M Terauchi, Pinfen Yang, Steven Ball, Chris Bowler, Carol L Dieckmann, Vadim N Gladyshev, Pamela Green, Richard Jorgensen, Stephen Mayfield, Bernd Mueller-Roeber, Sathish Rajamani, Richard T Sayre, Peter Brokstein, Inna Dubchak, David Goodstein, Leila Hornick, Y Wayne Huang, Jinal Jhaveri, Yigong Luo, Diego Martínez, Wing Chi Abby Ngau, Bobby Otillar, Alexander Poliakov, Aaron Porter, Lukasz Szajkowski, Gregory Werner, Kemin Zhou, Igor V Grigoriev, Daniel S Rokhsar, and Arthur R Grossman
"The Chlamydomonas genome reveals the evolution of key animal and plant functions."
Science 318, 245-50 (2007).

Haiyan Liu, Judith A Enyeart, and John J Enyeart
"Potent inhibition of native TREK-1 K channels by selected dihydropyridine Ca2 channel antagonists."
J. Pharmacol. Exp. Ther. 323, 39-48 (2007).

Mahmood Khan, Vijay Kumar Kutala, Deepti S Vikram, Sheik Wisel, Simi M Chacko, M Lakshmi Kuppusamy, Iyyapu K Mohan, Jay L Zweier, Pawel Kwiatkowski, and Periannan Kuppusamy
"Skeletal myoblasts transplanted in the ischemic myocardium enhance in situ oxygenation and recovery of contractile function."
Am. J. Physiol. Heart Circ. Physiol. 293, H2129-39 (2007).

Catalina Norman, Jack A Rall, Svetlana B Tikunova, and Jonathan P Davis
"Modulation of the rate of cardiac muscle contraction by troponin C constructs with various calcium binding affinities."
Am. J. Physiol. Heart Circ. Physiol. 293, H2580-7 (2007).

Deepti S Vikram, Jay L Zweier, and Periannan Kuppusamy
"Methods for noninvasive imaging of tissue hypoxia."
Antioxid. Redox Signal. 9, 1745-56 (2007).

Rajarsi Mandal, Vijay Kumar Kutala, Mahmood Khan, Iyyapu K Mohan, Saradhadevi Varadharaj, Arun Sridhar, Cynthia A Carnes, Tamás Kálai, Kálmán Hideg, and Periannan Kuppusamy
"N-hydroxy-pyrroline modification of verapamil exhibits antioxidant protection of the heart against ischemia/reperfusion-induced cardiac dysfunction without compromising its calcium antagonistic activity."
J. Pharmacol. Exp. Ther. 323, 119-27 (2007).

Aditi C Kulkarni, Periannan Kuppusamy, and Narasimham Parinandi
"Oxygen, the lead actor in the pathophysiologic drama enactment of the trinity of normoxia, hypoxia, and hyperoxia in disease and therapy."
Antioxid. Redox Signal. 9, 1717-30 (2007).

Tsuyoshi Ikura, Satoshi Tashiro, Akemi Kakino, Hiroki Shima, Naduparambil Jacob, Ravindra Amunugama, Kristine Yoder, Shunsuke Izumi, Isao Kuraoka, Kiyoji Tanaka, Hiroshi Kimura, Masae Ikura, Shuichi Nishikubo, Takashi Ito, Akihiko Muto, Kiyoshi Miyagawa, Shunichi Takeda, Richard Fishel, Kazuhiko Igarashi, and Kenji Kamiya
"DNA damage-dependent acetylation and ubiquitination of H2AX enhances chromatin dynamics."
Mol. Cell. Biol. 27, 7028-40 (2007).

R C Venu, Yulin Jia, Malali Gowda, Melissa H Jia, Chatchawan Jantasuriyarat, Eric Stahlberg, Huameng Li, Andrew Rhineheart, Prashanth Boddhireddy, Pratibha Singh, Neil Rutger, David Kudrna, Rod Wing, James C Nelson, and Guo-Liang Wang
"RL-SAGE and microarray analysis of the rice transcriptome after Rhizoctonia solani infection."
Mol. Genet. Genomics 278, 421-31 (2007).

Ali A Hassanali and Sherwin J Singer
"Model for the water-amorphous silica interface: the undissociated surface."
The journal of physical chemistry. B 111, 11181-93 (2007).

Cristian Dumitrescu, Roberto Biondi, Yong Xia, Arturo J Cardounel, Lawrence J Druhan, Giuseppe Ambrosio, and Jay L Zweier
"Myocardial ischemia results in tetrahydrobiopterin BH4 oxidation with impaired endothelial function ameliorated by BH4."
Proc. Natl. Acad. Sci. U.S.A. 104, 15081-6 (2007).

Yoshinori Nishijima, Arun Sridhar, Serge Viatchenko-Karpinski, Courtney Shaw, John D Bonagura, William T Abraham, Mandar S Joshi, John Anthony Bauer, Robert L Hamlin, Sandor Györke, David S Feldman, and Cynthia A Carnes
"Chronic cardiac resynchronization therapy and reverse ventricular remodeling in a model of nonischemic cardiomyopathy."
Life Sci. 81, 1152-9 (2007).

Xuehai Zhu, Bin Liu, Shaotang Zhou, Yeong-Renn Chen, Yuanmu Deng, Jay L Zweier, and Guanglong He
"Ischemic preconditioning prevents in vivo hyperoxygenation in postischemic myocardium with preservation of mitochondrial oxygen consumption."
Am. J. Physiol. Heart Circ. Physiol. 293, H1442-50 (2007).

Jessica A Falk, Sverre E Aune, Vijay K Kutala, Periannan Kuppusamy, and Mark G Angelos
"Inhibition of peroxynitrite precursors, NO and O2, at the onset of reperfusion improves myocardial recovery."
Resuscitation 74, 508-15 (2007).

Deepti S Vikram, Anna Bratasz, Rizwan Ahmad, and Periannan Kuppusamy
"A comparative evaluation of EPR and OxyLite oximetry using a random sampling of pO2 in a murine tumor."
Radiat. Res. 168, 308-15 (2007).

Erin E Congdon, Mihaela Necula, Robert D Blackstone, and Jeff Kuret
"Potency of a tau fibrillization inhibitor is influenced by its aggregation state."
Arch. Biochem. Biophys. 465, 127-35 (2007).

Rinku Jain and Michael K Chan
"Support for a potential role of E. coli oligopeptidase A in protein degradation."
Biochem. Biophys. Res. Commun. 359, 486-90 (2007).

Haiyan Liu, Judith A Enyeart, and John J Enyeart
"Angiotensin II inhibits native bTREK-1 K channels through a PLC-, kinase C-, and PIP2-independent pathway requiring ATP hydrolysis."
Am. J. Physiol., Cell Physiol. 293, C682-95 (2007).

Rizwan Ahmad, Deepti S Vikram, Bradley Clymer, Lee C Potter, Yuanmu Deng, Parthasarathy Srinivasan, Jay L Zweier, and Periannan Kuppusamy
"Uniform distribution of projection data for improved reconstruction quality of 4D EPR imaging."
J. Magn. Reson. 187, 277-87 (2007).

W H Bisson, A V Cheltsov, N Bruey-Sedano, B Lin, J Chen, N Goldberger, L T May, A Christopoulos, J T Dalton, P M Sexton, X-K Zhang, and R Abagyan
"Discovery of antiandrogen activity of nonsteroidal scaffolds of marketed drugs."
Proc. Natl. Acad. Sci. U.S.A. 104, 11927-32 (2007).

Sudarshan Seshadri, Michelle D Duncan, Judith M Hart, Mikhail A Gavrilin, and Mark D Wewers
"Pyrin levels in human monocytes and monocyte-derived macrophages regulate IL-1beta processing and release."
J. Immunol. 179, 1274-81 (2007).

Srisunder Subramaniam, Hari B Kamadurai, and Mark P Foster
"Trans cooperativity by a split DNA recombinase the central and catalytic domains of bacteriophage lambda integrase cooperate in cleaving DNA substrates when the two domains are not covalently linked."
J. Mol. Biol. 370, 303-14 (2007).

Guanglong He, Cristian Dumitrescu, Sergey Petryakov, Yuanmu Deng, Eric Kesselring, and Jay L Zweier
"Transverse oriented electric field re-entrant resonator TERR with automatic tuning and coupling control for EPR spectroscopy and imaging of the beating heart."
J. Magn. Reson. 187, 57-65 (2007).

Xiaodan Su, Naduparambil K Jacob, Ravindra Amunugama, David M Lucas, Amy R Knapp, Chen Ren, Melanie E Davis, Guido Marcucci, Mark R Parthun, John C Byrd, Richard Fishel, and Michael A Freitas
"Liquid chromatography mass spectrometry profiling of histones."
J. Chromatogr. B Analyt. Technol. Biomed. Life Sci. 850, 440-54 (2007).

Jonathan P Davis, Catalina Norman, Tomoyoshi Kobayashi, R John Solaro, Darl R Swartz, and Svetlana B Tikunova
"Effects of thin and thick filament proteins on calcium binding and exchange with cardiac troponin C."
Biophys. J. 92, 3195-206 (2007).

Malali Gowda, R-C Venu, Huameng Li, Chatchawan Jantasuriyarat, Songbiao Chen, Maria Bellizzi, Vishal Pampanwar, HyeRan Kim, Ralph A Dean, Eric Stahlberg, Rod Wing, Cari Soderlund, and Guo-Liang Wang
"Magnaporthe grisea infection triggers RNA variation and antisense transcript expression in rice."
Plant Physiol. 144, 524-33 (2007).

Anna Bratasz, Aditi C Kulkarni, and Periannan Kuppusamy
"A highly sensitive biocompatible spin probe for imaging of oxygen concentration in tissues."
Biophys. J. 92, 2918-25 (2007).

Sathish Rajamani, Jinge Zhu, Dehua Pei, and Richard Sayre
"A LuxP-FRET-based reporter for the detection and quantification of AI-2 bacterial quorum-sensing signal compounds."
Biochemistry 46, 3990-7 (2007).

Weihong Qiu, Lijuan Wang, Wenyun Lu, Amanda Boechler, David A R Sanders, and Dongping Zhong
"Dissection of complex protein dynamics in human thioredoxin."
Proc. Natl. Acad. Sci. U.S.A. 104, 5366-71 (2007).

Gunjan Agarwal, Cosmin Mihai, and Daniel F Iscru
"Interaction of discoidin domain receptor 1 with collagen type 1."
J. Mol. Biol. 367, 443-55 (2007).

Tanping Li, Ali A Hassanali, Ya-Ting Kao, Dongping Zhong, and Sherwin J Singer
"Hydration dynamics and time scales of coupled water-protein fluctuations."
J. Am. Chem. Soc. 129, 3376-82 (2007).

Kun-Yun Yang and Richard P Swenson
"Modulation of the redox properties of the flavin cofactor through hydrogen-bonding interactions with the N5 atom: role of alphaSer254 in the electron-transfer flavoprotein from the methylotrophic bacterium W3A1."
Biochemistry 46, 2289-97 (2007).

Kun-Yun Yang and Richard P Swenson
"Nonresonance Raman study of the flavin cofactor and its interactions in the methylotrophic bacterium W3A1 electron-transfer flavoprotein."
Biochemistry 46, 2298-305 (2007).

Sheik Wisel, Simi M Chacko, M Lakshmi Kuppusamy, Ramasamy P Pandian, Mahmood Khan, Vijay Kumar Kutala, Richard W Burry, Benjamin Sun, Pawel Kwiatkowski, and Periannan Kuppusamy
"Labeling of skeletal myoblasts with a novel oxygen-sensing spin probe for noninvasive monitoring of in situ oxygenation and cell therapy in heart."
Am. J. Physiol. Heart Circ. Physiol. 292, H1254-61 (2007).

Jessica K Alexander, Ashleigh Hillier, Ryan M Smith, Madalina E Tivarus, and David Q Beversdorf
"Beta-adrenergic modulation of cognitive flexibility during stress."
Journal of cognitive neuroscience 19, 468-78 (2007).

Rizwan Ahmad, Yuanmu Deng, Deepti S Vikram, Bradley Clymer, Parthasarathy Srinivasan, Jay L Zweier, and Periannan Kuppusamy
"Quasi Monte Carlo-based isotropic distribution of gradient directions for improved reconstruction quality of 3D EPR imaging."
J. Magn. Reson. 184, 236-45 (2007).

Rizwan Ahmad, Bradley Clymer, Deepti S Vikram, Yuanmu Deng, Hiroshi Hirata, Jay L Zweier, and Periannan Kuppusamy
"Enhanced resolution for EPR imaging by two-step deblurring."
J. Magn. Reson. 184, 246-57 (2007).

Mark P Foster, Craig A McElroy, and Carlos D Amero
"Solution NMR of large molecules and assemblies."
Biochemistry 46, 331-40 (2007).

Sathish Rajamani, Surasak Siripornadulsil, Vanessa Falcao, Moacir Torres, Pio Colepicolo, and Richard Sayre
"Phycoremediation of heavy metals using transgenic microalgae."
Adv. Exp. Med. Biol. 616, 99-109 (2007).

Ya-Ting Kao, Chaitanya Saxena, Lijuan Wang, Aziz Sancar, and Dongping Zhong
"Femtochemistry in enzyme catalysis DNA photolyase."
Cell Biochem. Biophys. 48, 32-44 (2007).

Jason D Stoner, Thomas L Clanton, Sverre E Aune, and Mark G Angelos
"O2 delivery and redox state are determinants of compartment-specific reactive O2 species in myocardial reperfusion."
Am. J. Physiol. Heart Circ. Physiol. 292, H109-16 (2007).

Malali Gowda, Huameng Li, and Guo-Liang Wang
"Robust analysis of 5-transcript ends: a high-throughput protocol for characterization of sequence diversity of transcription start sites."
Nat Protoc 2, 1622-32 (2007).

2006

Junan Li, Anjali Mahajan, and Ming-Daw Tsai
"Ankyrin repeat a unique motif mediating protein-protein interactions."
Biochemistry 45, 15168-78 (2006).

Tennille Presley, Periannan Kuppusamy, Jay L Zweier, and Govindasamy Ilangovan
"Electron paramagnetic resonance oximetry as a quantitative method to measure cellular respiration a consideration of oxygen diffusion interference."
Biophys. J. 91, 4623-31 (2006).

V Cherezov, E Yamashita, W Liu, M Zhalnina, W A Cramer, and M Caffrey
"In meso structure of the cobalamin transporter, BtuB, at 1.95 A resolution."
J. Mol. Biol. 364, 716-34 (2006).

Madalina E Tivarus, James W Ibinson, Ashleigh Hillier, Petra Schmalbrock, and David Q Beversdorf
"An fMRI study of semantic priming modulation of brain activity by varying semantic distances."
Cognitive and behavioral neurology official journal of the Society for Behavioral and Cognitive Neurology 19, 194-201 (2006).

O Alzate, T You, M Claybon, C Osorio, A Curtiss, and D H Dean
"Effects of disulfide bridges in domain I of Bacillus thuringiensis Cry1Aa delta-endotoxin on ion-channel formation in biological membranes."
Biochemistry 45, 13597-605 (2006).

Jongjoo Kim, Wenyun Lu, Weihong Qiu, Lijuan Wang, Martin Caffrey, and Dongping Zhong
"Ultrafast hydration dynamics in the lipidic cubic phase Discrete water structures in nanochannels."
The journal of physical chemistry. B 110, 21994-2000 (2006).

Guang Jia, Johannes T Heverhagen, Hans Polzer, Richard V Jacko, Jiachao Liang, Jun Zhang, Andrea L Levine, Thomas J Rosol, and Michael V Knopp
"Dynamic contrast enhanced magnetic resonance imaging as a biological marker to noninvasively assess the effect of finasteride on prostatic suburethral microcirculation."
J. Urol. 176, 2299-304 (2006).

Long-Sheng Chang, Abraham Jacob, Mark Lorenz, Jonathan Rock, Elena M Akhmametyeva, Georgeta Mihai, Petra Schmalbrock, Abhik R Chaudhury, Raul Lopez, Jyoji Yamate, Markus R John, Hannes Wickert, Brian A Neff, Edward Dodson, and D Bradley Welling
"Growth of benign and malignant schwannoma xenografts in severe combined immunodeficiency mice."
Laryngoscope 116, 2018-26 (2006).

Arun Sridhar, Spencer J Dech, Veronique A Lacombe, Terry S Elton, Sylvia A McCune, Ruth A Altschuld, and Cynthia A Carnes
"Abnormal diastolic currents in ventricular myocytes from spontaneous hypertensive heart failure rats."
Am. J. Physiol. Heart Circ. Physiol. 291, H2192-8 (2006).

Wei Liu and Martin Caffrey
"Interactions of tryptophan, tryptophan peptides, and tryptophan alkyl esters at curved membrane interfaces."
Biochemistry 45, 11713-26 (2006).

Luyuan Zhang, Ya-Ting Kao, Weihong Qiu, Lijuan Wang, and Dongping Zhong
"Femtosecond studies of tryptophan fluorescence dynamics in proteins local solvation and electronic quenching."
The journal of physical chemistry. B 110, 18097-103 (2006).

Weihong Qiu, Ya-Ting Kao, Luyuan Zhang, Yi Yang, Lijuan Wang, Wesley E Stites, Dongping Zhong, and Ahmed H Zewail
"Protein surface hydration mapped by site-specific mutations."
Proc. Natl. Acad. Sci. U.S.A. 103, 13979-84 (2006).

Cosmin Mihai, Daniel F Iscru, Lawrence J Druhan, Terry S Elton, and Gunjan Agarwal
"Discoidin domain receptor 2 inhibits fibrillogenesis of collagen type 1."
J. Mol. Biol. 361, 864-76 (2006).

Ryan M Smith, Madalina Tivarus, Heather L Campbell, Ashleigh Hillier, and David Q Beversdorf
"Apparent transient effects of recent "
Cognitive and behavioral neurology official journal of the Society for Behavioral and Cognitive Neurology 19, 157-64 (2006).

Rizwan Ahmad, Deepti S Vikram, Sergey Petryakov, Yuanmu Deng, Jay L Zweier, Periannan Kuppusamy, and Bradley Clymer
"Automated on-the-fly detection and correction procedure for EPR imaging data acquisition."
Magnetic resonance in medicine official journal of the Society of Magnetic Resonance in Medicine / Society of Magnetic Resonance in Medicine 56, 644-53 (2006).

Clara E Isaza, Radu Silaghi-Dumitrescu, Ramesh B Iyer, Donald M Kurtz, and Michael K Chan
"Structural basis for O2 sensing by the hemerythrin-like domain of a bacterial chemotaxis protein substrate tunnel and fluxional N terminus."
Biochemistry 45, 9023-31 (2006).

Sitaram Asur, Pichai Raman, Matthew Eric Otey, and Srinivasan Parthasarathy
"A model-based approach for mining membrane protein crystallization trials."
Bioinformatics 22, e40-8 (2006).

Guang Jia, Johannes T Heverhagen, Hannes Henry, Hans Polzer, Klaus T Baudendistel, Hendrik von Tengg-Kobligk, Andrea L Levine, Thomas J Rosol, and Michael V Knopp
"Pharmacokinetic parameters as a potential predictor of response to pharmacotherapy in benign prostatic hyperplasia a preclinical trial using dynamic contrast-enhanced MRI."
Magnetic resonance imaging 24, 721-5 (2006).

Hatice Gulcin Ozer and William C Ray
"MAVL/StickWRLD analyzing structural constraints using interpositional dependencies in biomolecular sequence alignments."
Nucleic Acids Res. 34, W133-6 (2006).

Hong-Zhen Hu, Rui Xiao, Chunbo Wang, Na Gao, Craig K Colton, Jackie D Wood, and Michael X Zhu
"Potentiation of TRPV3 channel function by unsaturated fatty acids."
J. Cell. Physiol. 208, 201-12 (2006).

Haiyan Liu, Sanjay J Danthi, and John J Enyeart
"Curcumin potently blocks Kv1.4 potassium channels."
Biochem. Biophys. Res. Commun. 344, 1161-5 (2006).

Ali A Hassanali, Tanping Li, Dongping Zhong, and Sherwin J Singer
"A molecular dynamics study of Lys-Trp-Lys: structure and dynamics in solution following photoexcitation."
The journal of physical chemistry. B 110, 10497-508 (2006).

Weihong Qiu, Luyuan Zhang, Oghaghare Okobiah, Yi Yang, Lijuan Wang, Dongping Zhong, and Ahmed H Zewail
"Ultrafast solvation dynamics of human serum albumin correlations with conformational transitions and site-selected recognition."
The journal of physical chemistry. B 110, 10540-9 (2006).

Gang Shen, Rakhi Rajan, Jinge Zhu, Charles E Bell, and Dehua Pei
"Design and synthesis of substrate and intermediate analogue inhibitors of S-ribosylhomocysteinase."
J. Med. Chem. 49, 3003-11 (2006).

Nitisha Hiranandani, Kenneth D Varian, Michelle M Monasky, and Paul M L Janssen
"Frequency-dependent contractile response of isolated cardiac trabeculae under hypo-, normo-, and hyperthermic conditions."
J. Appl. Physiol. 100, 1727-32 (2006).

Theresa J Kannanayakal, Haiyang Tao, Dale D Vandre, and Jeff Kuret
"Casein kinase-1 isoforms differentially associate with neurofibrillary and granulovacuolar degeneration lesions."
Acta Neuropathol. 111, 413-21 (2006).

Fatih Altiparmak, Hakan Ferhatosmanoglu, Selnur Erdal, and Donald C Trost
"Information mining over heterogeneous and high-dimensional time-series data in clinical trials databases."
IEEE transactions on information technology in biomedicine a publication of the IEEE Engineering in Medicine and Biology Society 10, 254-63 (2006).

Shawn A Hamidinia, Warren L Erdahl, Clifford J Chapman, Gregory E Steinbaugh, Richard W Taylor, and Douglas R Pfeiffer
"Monensin improves the effectiveness of meso-dimercaptosuccinate when used to treat lead intoxication in rats."
Environ. Health Perspect. 114, 484-93 (2006).

Rizwan Ahmad, Bradley Clymer, Yuanmu Deng, Guanglong He, Deepti Vikram, Periannan Kuppusamy, and Jay L Zweier
"Optimization of data acquisition for EPR imaging."
J. Magn. Reson. 179, 263-72 (2006).

Shawn A Hamidinia, Gregory E Steinbaugh, Warren L Erdahl, Richard W Taylor, and Douglas R Pfeiffer
"Selective transport of Pb2 and Cd2 across a phospholipid bilayer by a cyclohexanemonocarboxylic acid-capped 15-crown-5 ether."
J. Inorg. Biochem. 100, 403-12 (2006).

Baocheng Pan, Ke Shi, and Muttaiya Sundaralingam
"Base-tetrad swapping results in dimerization of RNA quadruplexes implications for formation of the i-motif RNA octaplex."
Proc. Natl. Acad. Sci. U.S.A. 103, 3130-4 (2006).

Tahsin Kurc, Daniel A Janies, Andrew D Johnson, Stephen Langella, Scott Oster, Shannon Hastings, Farhat Habib, Terry Camerlengo, David Ervin, Umit V Catalyurek, and Joel H Saltz
"An XML-based system for synthesis of data from disparate databases."
Journal of the American Medical Informatics Association : JAMIA 13, 289-301 (2006).

Kishore Mosaliganti, Guang Jia, Johannes Heverhagen, Raghu Machiraju, Joel Saltz, and Michael Knopp
"Preventing signal degradation during elastic matching of noisy DCE-MR eye images."
Medical image computing and computer-assisted intervention MICCAI ... International Conference on Medical Image Computing and Computer-Assisted Intervention 9, 832-9 (2006).

Rakhi Rajan, James W Wisler, and Charles E Bell
"Probing the DNA sequence specificity of Escherichia coli RECA protein."
Nucleic Acids Res. 34, 2463-71 (2006).

P Raman, V Cherezov, and M Caffrey
"The Membrane Protein Data Bank."
Cell. Mol. Life Sci. 63, 36-51 (2006).

Malali Gowda, R C Venu, Mohan B Raghupathy, Kan Nobuta, Huameng Li, Rod Wing, Eric Stahlberg, Sean Couglan, Christian D Haudenschild, Ralph Dean, Baek-Hie Nahm, Blake C Meyers, and Guo-Liang Wang
"Deep and comparative analysis of the mycelium and appressorium transcriptomes of Magnaporthe grisea using MPSS, RL-SAGE, and oligoarray methods."
BMC Genomics 7, 310 (2006).

Malali Gowda, Haumeng Li, Joe Alessi, Feng Chen, Richard Pratt, and Guo-Liang Wang
"Robust analysis of 5-transcript ends 5-RATE: a novel technique for transcriptome analysis and genome annotation."
Nucleic Acids Res. 34, e126 (2006).

2005

Ya-Ting Kao, Chaitanya Saxena, Lijuan Wang, Aziz Sancar, and Dongping Zhong
"Direct observation of thymine dimer repair in DNA by photolyase."
Proc. Natl. Acad. Sci. U.S.A. 102, 16128-32 (2005).

Anjali Mahajan, Chunhua Yuan, Brietta L Pike, Jörg Heierhorst, Chi-Fon Chang, and Ming-Daw Tsai
"FHA domain-ligand interactions importance of integrating chemical and biological approaches."
J. Am. Chem. Soc. 127, 14572-3 (2005).

Zuzana Kubalova, Dmitry Terentyev, Serge Viatchenko-Karpinski, Yoshinori Nishijima, Inna Györke, Radmila Terentyeva, Daise N Q da Cuñha, Arun Sridhar, David S Feldman, Robert L Hamlin, Cynthia A Carnes, and Sandor Györke
"Abnormal intrastore calcium signaling in chronic heart failure."
Proc. Natl. Acad. Sci. U.S.A. 102, 14104-9 (2005).

Weihong Qiu, Luyuan Zhang, Ya-Ting Kao, Wenyun Lu, Tanping Li, Jongjoo Kim, Gregory M Sollenberger, Lijuan Wang, and Dongping Zhong
"Ultrafast hydration dynamics in melittin folding and aggregation: helix formation and tetramer self-assembly."
The journal of physical chemistry. B 109, 16901-10 (2005).

John J Enyeart, Sanjay J Danthi, Haiyan Liu, and Judith A Enyeart
"Angiotensin II inhibits bTREK-1 K channels in adrenocortical cells by separate Ca2- and ATP hydrolysis-dependent mechanisms."
J. Biol. Chem. 280, 30814-28 (2005).

Benito Ordaz, Jisen Tang, Rui Xiao, Alfonso Salgado, Alicia Sampieri, Michael X Zhu, and Luis Vaca
"Calmodulin and calcium interplay in the modulation of TRPC5 channel activity. Identification of a novel C-terminal domain for calcium/calmodulin-mediated facilitation."
J. Biol. Chem. 280, 30788-96 (2005).

Mihaela Necula, Carmen N Chirita, and Jeff Kuret
"Cyanine dye N744 inhibits tau fibrillization by blocking filament extension implications for the treatment of tauopathic neurodegenerative diseases."
Biochemistry 44, 10227-37 (2005).

Mariko Kinoshita-Kawada, Jisen Tang, Rui Xiao, Shuji Kaneko, J Kevin Foskett, and Michael X Zhu
"Inhibition of TRPC5 channels by Ca2-binding protein 1 in Xenopus oocytes."
Pflugers Arch. 450, 345-54 (2005).

Li Zuo and Thomas L Clanton
"Reactive oxygen species formation in the transition to hypoxia in skeletal muscle."
Am. J. Physiol., Cell Physiol. 289, C207-16 (2005).

Jeff Kuret, Erin E Congdon, Guibin Li, Haishan Yin, Xian Yu, and Qi Zhong
"Evaluating triggers and enhancers of tau fibrillization."
Microsc. Res. Tech. 67, 141-55 (2005).

Chaitanya Saxena, Haiyu Wang, I Halil Kavakli, Aziz Sancar, and Dongping Zhong
"Ultrafast dynamics of resonance energy transfer in cryptochrome."
J. Am. Chem. Soc. 127, 7984-5 (2005).

V P Wright, P F Klawitter, D F Iscru, A J Merola, and T L Clanton
"Superoxide scavengers augment contractile but not energetic responses to hypoxia in rat diaphragm."
J. Appl. Physiol. 98, 1753-60 (2005).

Cheng Chang, Abhijit Ray, and Peter Swaan
"In silico strategies for modeling membrane transporter function."
Drug Discov. Today 10, 663-71 (2005).

Carmen N Chirita, Erin E Congdon, Haishan Yin, and Jeff Kuret
"Triggers of full-length tau aggregation a role for partially folded intermediates."
Biochemistry 44, 5862-72 (2005).

Rinku Jain, Bing Hao, Ren-Peng Liu, and Michael K Chan
"Structures of E. coli peptide deformylase bound to formate insight into the preference for Fe2 over Zn2 as the active site metal."
J. Am. Chem. Soc. 127, 4558-9 (2005).

Marina Bakhtina, Soojin Lee, Yu Wang, Chris Dunlap, Brandon Lamarche, and Ming-Daw Tsai
"Use of viscogens, dNTPalphaS, and rhodiumIII as probes in stopped-flow experiments to obtain new evidence for the mechanism of catalysis by DNA polymerase beta."
Biochemistry 44, 5177-87 (2005).

Guang Jia, Klaus T Baudendistel, Hendrik von Tengg-Kobligk, Johannes T Heverhagen, Hans Polzer, Hannes Henry, Matthew J McAuliffe, Andrea L Levine, Thomas J Rosol, and Michael V Knopp
"Assessing prostate volume by magnetic resonance imaging a comparison of different measurement approaches for organ volume analysis."
Investigative radiology 40, 243-8 (2005).

W Liu and M Caffrey
"Gramicidin structure and disposition in highly curved membranes."
J. Struct. Biol. 150, 23-40 (2005).

Rakhi Rajan, Jinge Zhu, Xubo Hu, Dehua Pei, and Charles E Bell
"Crystal structure of S-ribosylhomocysteinase LuxS in complex with a catalytic 2-ketone intermediate."
Biochemistry 44, 3745-53 (2005).

Donald W Chakeres, Chastity D S Whitaker, Roger A Dashner, Douglas W Scharre, David Q Beversdorf, Abhik Raychaudhury, and Petra Schmalbrock
"High-resolution 8 Tesla imaging of the formalin-fixed normal human hippocampus."
Clinical anatomy New York, N.Y. 18, 88-91 (2005).

Mihaela Necula and Jeff Kuret
"Site-specific pseudophosphorylation modulates the rate of tau filament dissociation."
FEBS Lett. 579, 1453-7 (2005).

Craig Hemann, Predrag Ilich, Amy L Stockert, Eun-Young Choi, and Russ Hille
"Resonance Raman studies of xanthine oxidase The reduced enzyme-product complex with violapterin."
The journal of physical chemistry. B 109, 3023-31 (2005).

Haiyu Wang, Chaitanya Saxena, Donghui Quan, Aziz Sancar, and Dongping Zhong
"Femtosecond dynamics of flavin cofactor in DNA photolyase radical reduction, local solvation, and charge recombination."
The journal of physical chemistry. B 109, 1329-33 (2005).

2004

Shawn A Hamidinia, Bo Tan, Warren L Erdahl, Clifford J Chapman, Richard W Taylor, and Douglas R Pfeiffer
"The ionophore nigericin transports Pb2 with high activity and selectivity a comparison to monensin and ionomycin."
Biochemistry 43, 15956-65 (2004).

Rakhi Rajan and Charles E Bell
"Crystal structure of RecA from Deinococcus radiodurans insights into the structural basis of extreme radioresistance."
J. Mol. Biol. 344, 951-63 (2004).

Lisa V Misquitta, Yohann Misquitta, Vadim Cherezov, Orla Slattery, Jakkam M Mohan, David Hart, Mariya Zhalnina, William A Cramer, and Martin Caffrey
"Membrane protein crystallization in lipidic mesophases with tailored bilayers."
Structure 12, 2113-24 (2004).

Mihaela Necula and Jeff Kuret
"Pseudophosphorylation and glycation of tau protein enhance but do not trigger fibrillization in vitro."
J. Biol. Chem. 279, 49694-703 (2004).

Michelle P Roettger, Kevin A Fiala, Susmitha Sompalli, Yuxia Dong, and Zucai Suo
"Pre-steady-state kinetic studies of the fidelity of human DNA polymerase mu."
Biochemistry 43, 13827-38 (2004).

Yohann Misquitta, Vadim Cherezov, Fabien Havas, Suzanne Patterson, Jakkam M Mohan, Angela J Wells, David J Hart, and Martin Caffrey
"Rational design of lipid for membrane protein crystallization."
J. Struct. Biol. 148, 169-75 (2004).

Mihaela Necula and Jeff Kuret
"A static laser light scattering assay for surfactant-induced tau fibrillization."
Anal. Biochem. 333, 205-15 (2004).

Chunhua Yuan, Junan Li, Anjali Mahajan, Ming Jye Poi, In-Ja L Byeon, and Ming-Daw Tsai
"Solution structure of the human oncogenic protein gankyrin containing seven ankyrin repeats and analysis of its structure--function relationship."
Biochemistry 43, 12152-61 (2004).

J T Heverhagen, H von Tengg-Kobligk, K T Baudendistel, G Jia, H Polzer, H Henry, A L Levine, T J Rosol, and M V Knopp
"Benign prostate hyperplasia evaluation of treatment response with DCE MRI."
Magma New York, N.Y. 17, 5-11 (2004).

Brian S Palmer, Paul F Klawitter, Peter J Reiser, and Mark G Angelos
"Degradation of rat cardiac troponin I during ischemia independent of reperfusion."
Am. J. Physiol. Heart Circ. Physiol. 287, H1269-75 (2004).

Svetlana B Tikunova and Jonathan P Davis
"Designing calcium-sensitizing mutations in the regulatory domain of cardiac troponin C."
J. Biol. Chem. 279, 35341-52 (2004).

Brian S Palmer, Mersiha Hadziahmetovic, Timothy Veci, and Mark G Angelos
"Global ischemic duration and reperfusion function in the isolated perfused rat heart."
Resuscitation 62, 97-106 (2004).

Mihaela Necula and Jeff Kuret
"Electron microscopy as a quantitative method for investigating tau fibrillization."
Anal. Biochem. 329, 238-46 (2004).

Eun-Young Choi, Amy L Stockert, Silke Leimkühler, and Russ Hille
"Studies on the mechanism of action of xanthine oxidase."
J. Inorg. Biochem. 98, 841-8 (2004).

Jonathan P Davis, Jack A Rall, Catalina Alionte, and Svetlana B Tikunova
"Mutations of hydrophobic residues in the N-terminal domain of troponin C affect calcium binding and exchange with the troponin C-troponin I96-148 complex and muscle force production."
J. Biol. Chem. 279, 17348-60 (2004).

Carmen Chirita, Mihaela Necula, and Jeff Kuret
"Ligand-dependent inhibition and reversal of tau filament formation."
Biochemistry 43, 2879-87 (2004).

Carmen N Chirita and Jeff Kuret
"Evidence for an intermediate in tau filament formation."
Biochemistry 43, 1704-14 (2004).

Gopal J Babu, Debra Wheeler, Oscar Alzate, and Muthu Periasamy
"Solubilization of membrane proteins for two-dimensional gel electrophoresis identification of sarcoplasmic reticulum membrane proteins."
Anal. Biochem. 325, 121-5 (2004).

Subramaniam Eswaramoorthy, Sambhorao T Rao, Baocheng Pan, and Muttaiya Sundaralingam
"Structure of the dodecamer rGAUCACUUCGGU with four 5-overhang nucleotides."
Acta Crystallogr. D Biol. Crystallogr. 60, 8-12 (2004).

Ke Shi, Baocheng Pan, Douglas Tippin, and Muttaiya Sundaralingam
"Structures of dGm5CGm5CGCGC and dGCGCGm5CGm5C effects of methylation on alternating DNA octamers."
Acta Crystallogr. D Biol. Crystallogr. 60, 61-5 (2004).

Paul F Klawitter and Thomas L Clanton
"Tension-time index, fatigue, and energetics in isolated rat diaphragm a new experimental model."
J. Appl. Physiol. 96, 89-95 (2004).

Max Teplitski, Hancai Chen, Sathish Rajamani, Mengsheng Gao, Massimo Merighi, Richard T Sayre, Jayne B Robinson, Barry G Rolfe, and Wolfgang D Bauer
"Chlamydomonas reinhardtii secretes compounds that mimic bacterial signals and interfere with quorum sensing regulation in bacteria."
Plant Physiol. 134, 137-46 (2004).

2003

Junpeng Deng, Baocheng Pan, and Muttaiya Sundaralingam
"Structure of dITITACAC complexed with distamycin at 1.6 A resolution."
Acta Crystallogr. D Biol. Crystallogr. 59, 2342-4 (2003).

Dongyan Qin, Hyun Lee, Chunhua Yuan, Yong Ju, and Ming-Daw Tsai
"Identification of potential binding sites for the FHA domain of human Chk2 by in vitro binding studies."
Biochem. Biophys. Res. Commun. 311, 803-8 (2003).

Mihaela Necula, Carmen N Chirita, and Jeff Kuret
"Rapid anionic micelle-mediated alpha-synuclein fibrillization in vitro."
J. Biol. Chem. 278, 46674-80 (2003).

Baocheng Pan, Yong Xiong, Ke Shi, and Muttaiya Sundaralingam
"Crystal structure of a bulged RNA tetraplex at 1.1 a resolution implications for a novel binding site in RNA tetraplex."
Structure 11, 1423-30 (2003).

Y Misquitta and M Caffrey
"Detergents destabilize the cubic phase of monoolein implications for membrane protein crystallization."
Biophys. J. 85, 3084-96 (2003).

Savita Khanna, Sashwati Roy, Hoon Ryu, Praveen Bahadduri, Peter W Swaan, Rajiv R Ratan, and Chandan K Sen
"Molecular basis of vitamin E action tocotrienol modulates 12-lipoxygenase, a key mediator of glutamate-induced neurodegeneration."
J. Biol. Chem. 278, 43508-15 (2003).

Li Zuo, Silviu Pasniciuc, Valerie P Wright, A John Merola, and Thomas L Clanton
"Sources for superoxide release: lessons from blockade of electron transport, NADPH oxidase, and anion channels in diaphragm."
Antioxid. Redox Signal. 5, 667-75 (2003).

Elizabeth L Gross and Douglas C Pearson
"Brownian dynamics simulations of the interaction of Chlamydomonas cytochrome f with plastocyanin and cytochrome c6."
Biophys. J. 85, 2055-68 (2003).

Mohd Amir F Abdullah, Oscar Alzate, Marwan Mohammad, Rebecca J McNall, Michael J Adang, and Donald H Dean
"Introduction of Culex toxicity into Bacillus thuringiensis Cry4Ba by protein engineering."
Appl. Environ. Microbiol. 69, 5343-53 (2003).

Ke Shi, Baocheng Pan, and Muttaiya Sundaralingam
"Structure of a B-form DNA/RNA chimera dCrGdATCG complexed with daunomycin at 1.5 A resolution."
Acta Crystallogr. D Biol. Crystallogr. 59, 1377-83 (2003).

Carmen N Chirita, Mihaela Necula, and Jeff Kuret
"Anionic micelles and vesicles induce tau fibrillization in vitro."
J. Biol. Chem. 278, 25644-50 (2003).

Baocheng Pan, Yong Xiong, Ke Shi, Junpeng Deng, and Muttaiya Sundaralingam
"Crystal structure of an RNA purine-rich tetraplex containing adenine tetrads implications for specific binding in RNA tetraplexes."
Structure 11, 815-23 (2003).

Baocheng Pan, Yong Xiong, Ke Shi, and Muttaiya Sundaralingam
"An eight-stranded helical fragment in RNA crystal structure implications for tetraplex interaction."
Structure 11, 825-31 (2003).

Srisunder Subramaniam, Arun K Tewari, Simone E Nunes-Duby, and Mark P Foster
"Dynamics and DNA substrate recognition by the catalytic domain of lambda integrase."
J. Mol. Biol. 329, 423-39 (2003).

Junpeng Deng, Yong Xiong, Baocheng Pan, and Muttaiya Sundaralingam
"Structure of an RNA dodecamer containing a fragment from SRP domain IV of Escherichia coli."
Acta Crystallogr. D Biol. Crystallogr. 59, 1004-11 (2003).

Ke Shi, Baocheng Pan, and Muttaiya Sundaralingam
"The crystal structure of an alternating RNA heptamer rGUAUACA forming a six base-paired duplex with 3-end adenine overhangs."
Nucleic Acids Res. 31, 1392-7 (2003).

Hari B Kamadurai, Srisunder Subramaniam, R Benjamin Jones, Kari B Green-Church, and Mark P Foster
"Protein folding coupled to DNA binding in the catalytic domain of bacteriophage lambda integrase detected by mass spectrometry."
Protein Sci. 12, 620-6 (2003).

Rinku Jain and Michael K Chan
"Mechanisms of ligand discrimination by heme proteins."
J. Biol. Inorg. Chem. 8, 1-11 (2003).

Boopathy Ramakrishnan, Chandra Sekharudu, Baocheng Pan, and Muttaiya Sundaralingam
"Near-atomic resolution crystal structure of an A-DNA decamer dCCCGATCGGG cobalt hexammine interaction with A-DNA."
Acta Crystallogr. D Biol. Crystallogr. 59, 67-72 (2003).

Ye Luo, Jonathan P Davis, Svetlana B Tikunova, Lawrence B Smillie, and Jack A Rall
"Myofibrillar determinants of rate of relaxation in skinned skeletal muscle fibers."
Adv. Exp. Med. Biol. 538, 573-81; discussion 581-2 (2003).

William C Ray and Charles J Daniels
"PACRAT a database and analysis system for archaeal and bacterial intergenic sequence features."
Nucleic Acids Res. 31, 109-13 (2003).

2002

Jonathan P Davis, Jack A Rall, Peter J Reiser, Lawrence B Smillie, and Svetlana B Tikunova
"Engineering competitive magnesium binding into the first EF-hand of skeletal troponin C."
J. Biol. Chem. 277, 49716-26 (2002).

Mark G Angelos, Holt N Murray, Robert T Gorsline, and Paul F Klawitter
"Glucose, insulin and potassium GIK during reperfusion mediates improved myocardial bioenergetics."
Resuscitation 55, 329-36 (2002).

Vadim Cherezov, Jeffrey Clogston, Yohann Misquitta, Wissam Abdel-Gawad, and Martin Caffrey
"Membrane protein crystallization in meso lipid type-tailoring of the cubic phase."
Biophys. J. 83, 3393-407 (2002).

Paul F Klawitter, Holt N Murray, Thomas L Clanton, Brian S Palmer, and Mark G Angelos
"Low flow after global ischemia to improve postischemic myocardial function and bioenergetics."
Crit. Care Med. 30, 2542-7 (2002).

Surasak Siripornadulsil, Samuel Traina, Desh Pal S Verma, and Richard T Sayre
"Molecular mechanisms of proline-mediated tolerance to toxic heavy metals in transgenic microalgae."
Plant Cell 14, 2837-47 (2002).

Bing Hao, Clara Isaza, Joseph Arndt, Michael Soltis, and Michael K Chan
"Structure-based mechanism of O2 sensing and ligand discrimination by the FixL heme domain of Bradyrhizobium japonicum."
Biochemistry 41, 12952-8 (2002).

Shawn A Hamidinia, Olga I Shimelis, Bo Tan, Warren L Erdahl, Clifford J Chapman, Gordon D Renkes, Richard W Taylor, and Douglas R Pfeiffer
"Monensin mediates a rapid and selective transport of Pb2. Possible application of monensin for the treatment of Pb2 intoxication."
J. Biol. Chem. 277, 38111-20 (2002).

Paul F Klawitter, Holt N Murray, Thomas L Clanton, and Mark G Angelos
"Reactive oxygen species generated during myocardial ischemia enable energetic recovery during reperfusion."
Am. J. Physiol. Heart Circ. Physiol. 283, H1656-61 (2002).

Svetlana B Tikunova, Jack A Rall, and Jonathan P Davis
"Effect of hydrophobic residue substitutions with glutamine on Ca2 binding and exchange with the N-domain of troponin C."
Biochemistry 41, 6697-705 (2002).

Peter Rubinelli, Surasak Siripornadulsil, Fei Gao-Rubinelli, and Richard T Sayre
"Cadmium- and iron-stress-inducible gene expression in the green alga Chlamydomonas reinhardtii evidence for H43 protein function in iron assimilation."
Planta 215, 1-13 (2002).

Hee-Jung Kim and Mark P Foster
"Characterization of Ad5 E3-14.7K, an adenoviral inhibitor of apoptosis structure, oligomeric state, and metal binding."
Protein Sci. 11, 1117-28 (2002).

Cristian Dumitrescu, Prakash Narayan, Yuanna Cheng, Igor R Efimov, and Ruth A Altschuld
"Phase I and phase II of short-term mechanical restitution in perfused rat left ventricles."
Am. J. Physiol. Heart Circ. Physiol. 282, H1311-9 (2002).

Cristian Dumitrescu, Prakash Narayan, Igor R Efimov, Yuanna Cheng, M Judith Radin, Sylvia A McCune, and Ruth A Altschuld
"Mechanical alternans and restitution in failing SHHF rat left ventricles."
Am. J. Physiol. Heart Circ. Physiol. 282, H1320-6 (2002).

Muttaiya Sundaralingam and Baocheng Pan
"Hydrogen and hydration of DNA and RNA oligonucleotides."
Biophys. Chem. 95, 273-82 (2002).

Sheref S Mansy, Yong Xiong, Craig Hemann, Russ Hille, M Sundaralingam, and J A Cowan
"Crystal structure and stability studies of C77S HiPIP a serine ligated 4Fe-4S cluster."
Biochemistry 41, 1195-201 (2002).

Li Zuo and Thomas L Clanton
"Detection of reactive oxygen and nitrogen species in tissues using redox-sensitive fluorescent probes."
Meth. Enzymol. 352, 307-25 (2002).

J David Johnson and Svetlana B Tikunova
"Fluorescence methods for measuring calcium affinity and calcium exchange with proteins."
Methods Mol. Biol. 173, 89-102 (2002).

2001

E Wang, W L Erdahl, S A Hamidinia, C J Chapman, R W Taylor, and D R Pfeiffer
"Transport properties of the calcium ionophore ETH-129."
Biophys. J. 81, 3275-84 (2001).

W C Ray, R S Munson, and C J Daniels
"Tricross using dot-plots in sequence-id space to detect uncataloged intergenic features."
Bioinformatics 17, 1105-12 (2001).

J Deng, Y Xiong, and M Sundaralingam
"X-ray analysis of an RNA tetraplex UGGGGU4 with divalent Sr2 ions at subatomic resolution 0.61 A."
Proc. Natl. Acad. Sci. U.S.A. 98, 13665-70 (2001).

Y Xiong, J Deng, C Sudarsanakumar, and M Sundaralingam
"Crystal structure of an RNA duplex rgugucgcac2 with uridine bulges."
J. Mol. Biol. 313, 573-82 (2001).

J Deng, Y Xiong, C Sudarsanakumar, K Shi, and M Sundaralingam
"Crystal structures of two forms of a 14-mer RNA/DNA chimer duplex with double UU bulges a novel intramolecular UA x U base triple."
RNA 7, 1425-31 (2001).

Y Misquitta and M Caffrey
"Rational design of lipid molecular structure a case study involving the C191c10 monoacylglycerol."
Biophys. J. 81, 1047-58 (2001).

J Ren, H Z Hu, A M Starodub, and J D Wood
"Galanin suppresses calcium conductance and activates inwardly rectifying potassium channels in myenteric neurones from guinea-pig small intestine."
Neurogastroenterol. Motil. 13, 247-54 (2001).

T L Clanton and P F Klawitter
"Invited review Adaptive responses of skeletal muscle to intermittent hypoxia the known and the unknown."
J. Appl. Physiol. 90, 2476-87 (2001).

F Chang, L H Bradley, and R P Swenson
"Evaluation of the hydrogen bonding interactions and their effects on the oxidation-reduction potentials for the riboflavin complex of the Desulfovibrio vulgaris flavodoxin."
Biochim. Biophys. Acta 1504, 319-28 (2001).

S B Tikunova, D J Black, J D Johnson, and J P Davis
"Modifying Mg2 binding and exchange with the N-terminal of calmodulin."
Biochemistry 40, 3348-53 (2001).

Z Zhang, J Tang, S Tikunova, J D Johnson, Z Chen, N Qin, A Dietrich, E Stefani, L Birnbaumer, and M X Zhu
"Activation of Trp3 by inositol 1,4,5-trisphosphate receptors through displacement of inhibitory calmodulin from a common binding domain."
Proc. Natl. Acad. Sci. U.S.A. 98, 3168-73 (2001).

M W Foster, S Bian, K K Surerus, and J A Cowan
"Elucidation of a 4Fe-4S cluster degradation pathway rapid kinetic studies of the degradation of Chromatium vinosum HiPIP."
J. Biol. Inorg. Chem. 6, 266-74 (2001).

E P Alcantara, O Alzate, M K Lee, A Curtiss, and D H Dean
"Role of alpha-helix seven of Bacillus thuringiensis Cry1Ab delta-endotoxin in membrane insertion, structural stability, and ion channel activity."
Biochemistry 40, 2540-7 (2001).

S Arnold, A Curtiss, D H Dean, and O Alzate
"The role of a proline-induced broken-helix motif in alpha-helix 2 of Bacillus thuringiensis delta-endotoxins."
FEBS Lett. 490, 70-4 (2001).

W C Ray and C J Daniels
"The PACRAT system an extensible WWW-based system for correlated sequence retrieval, storage and analysis."
Bioinformatics 17, 100-4 (2001).

2000

D J Black, S B Tikunova, J D Johnson, and J P Davis
"Acid pairs increase the N-terminal Ca2 affinity of CaM by increasing the rate of Ca2 association."
Biochemistry 39, 13831-7 (2000).

J Deng and M Sundaralingam
"Synthesis and crystal structure of an octamer RNA rguguuuac/rguaggcac with G.G/U.U tandem wobble base pairs comparison with other tandem G.U pairs."
Nucleic Acids Res. 28, 4376-81 (2000).

L Zuo, F L Christofi, V P Wright, C Y Liu, A J Merola, L J Berliner, and T L Clanton
"Intra- and extracellular measurement of reactive oxygen species produced during heat stress in diaphragm muscle."
Am. J. Physiol., Cell Physiol. 279, C1058-66 (2000).

Y Xiong and M Sundaralingam
"Two crystal forms of helix II of Xenopus laevis 5S rRNA with a cytosine bulge."
RNA 6, 1316-24 (2000).

A M Starodub and J D Wood
"Histamine suppresses A-type potassium current in myenteric neurons from guinea pig small intestine."
J. Pharmacol. Exp. Ther. 294, 555-61 (2000).

C Sudarsanakumar, Y Xiong, and M Sundaralingam
"Crystal structure of an adenine bulge in the RNA chain of a DNA.RNA hybrid, dCTCCTCTTC.rgaagagagag."
J. Mol. Biol. 299, 103-12 (2000).

Y Xiong and M Sundaralingam
"Crystal structure of a DNA.RNA hybrid duplex with a polypurine RNA rgaagaagag and a complementary polypyrimidine DNA dCTCTTCTTC."
Nucleic Acids Res. 28, 2171-6 (2000).

M G Angelos, C A Torres, M D Waite, D P Rath, H Zhu, P D Beckley, B S Palmer, and P M Robitaille
"Left ventricular myocardial adenosine triphosphate changes during reperfusion of ventricular fibrillation: the influence of flow and epinephrine."
Crit. Care Med. 28, 1503-8 (2000).

A M Starodub and J D Wood
"Histamine H2 receptor activated chloride conductance in myenteric neurons from guinea pig small intestine."
J. Neurophysiol. 83, 1809-16 (2000).

A M Starodub and J D Wood
"A-type potassium current in myenteric neurons from guinea-pig small intestine."
Neuroscience 99, 389-96 (2000).

1999

R Kondo, S B Tikunova, M J Cho, and J D Johnson
"A point mutation in a plant calmodulin is responsible for its inhibition of nitric-oxide synthase."
J. Biol. Chem. 274, 36213-8 (1999).

M Audtho, A P Valaitis, O Alzate, and D H Dean
"Production of chymotrypsin-resistant Bacillus thuringiensis Cry2Aa1 delta-endotoxin by protein engineering."
Appl. Environ. Microbiol. 65, 4601-5 (1999).

M G Angelos, C A Torres, D P Rath, H Zhu, P D Beckley, and P M Robitaille
"In-vivo myocardial substrate alteration during perfused ventricular fibrillation."
Academic emergency medicine : official journal of the Society for Academic Emergency Medicine 6, 581-7 (1999).

F C Chang and R P Swenson
"The midpoint potentials for the oxidized-semiquinone couple for Gly57 mutants of the Clostridium beijerinckii flavodoxin correlate with changes in the hydrogen-bonding interaction with the proton on N5 of the reduced flavin mononucleotide cofactor as measured by NMR chemical shift temperature dependencies."
Biochemistry 38, 7168-76 (1999).

J P Davis, S B Tikunova, M P Walsh, and J D Johnson
"Characterizing the response of calcium signal transducers to generated calcium transients."
Biochemistry 38, 4235-44 (1999).

B Pan, S N Mitra, and M Sundaralingam
"Crystal structure of an RNA 16-mer duplex RGCAGAGUUAAAUCUGC2 with nonadjacent Gsyn.Aanti mispairs."
Biochemistry 38, 2826-31 (1999).

A V Zholos, L V Baidan, A M Starodub, and J D Wood
"Potassium channels of myenteric neurons in guinea-pig small intestine."
Neuroscience 89, 603-18 (1999).

M Xia, R Dempski, and R Hille
"The reductive half-reaction of xanthine oxidase. Reaction with aldehyde substrates and identification of the catalytically labile oxygen."
J. Biol. Chem. 274, 3323-30 (1999).

A M Starodub and J D Wood
"Selectivity of omega-CgTx-MVIIC toxin from Conus magus on calcium currents in enteric neurons."
Life Sci. 64, PL305-10 (1999).

1998

B Pan, S N Mitra, L Sun, D Hart, and M Sundaralingam
"Crystal structure of an RNA octamer duplex rCCCIUGGG2 incorporating tandem I.U wobbles."
Nucleic Acids Res. 26, 5699-706 (1998).

Y Xiong and M Sundaralingam
"Crystal structure and conformation of a DNA-RNA hybrid duplex with a polypurine RNA strand dTTCTTBr5CTTC-rGAAGAAGAA."
Structure 6, 1493-501 (1998).

D C Pearson and E L Gross
"Brownian dynamics study of the interaction between plastocyanin and cytochrome f."
Biophys. J. 75, 2698-711 (1998).

B Pan, S N Mitra, and M Sundaralingam
"Structure of a 16-mer RNA duplex rGCAGACUUAAAUCUGC2 with wobble C.A mismatches."
J. Mol. Biol. 283, 977-84 (1998).

P M Robitaille, A M Abduljalil, A Kangarlu, X Zhang, Y Yu, R Burgess, S Bair, P Noa, L Yang, H Zhu, B Palmer, Z Jiang, D M Chakeres, and D Spigos
"Human magnetic resonance imaging at 8 T."
NMR in biomedicine 11, 263-5 (1998).

E Wang, R W Taylor, and D R Pfeiffer
"Mechanism and specificity of lanthanide series cation transport by ionophores A23187, 4-BrA23187, and ionomycin."
Biophys. J. 75, 1244-54 (1998).

P A Wahr, J D Johnson, and J A Rall
"Determinants of relaxation rate in skinned frog skeletal muscle fibers."
Am. J. Physiol. 274, C1608-15 (1998).

J Michael ODonnell, P Narayan, M Q Bailey, A M Abduljalil, R A Altschuld, S A McCune, and P M Robitaille
"31P-NMR analysis of congestive heart failure in the SHHF/Mcc-facp rat heart."
J. Mol. Cell. Cardiol. 30, 235-41 (1998).

R M Phillips, P Narayan, A M Gómez, K Dilly, L R Jones, W J Lederer, and R A Altschuld
"Sarcoplasmic reticulum in heart failure central player or bystander"
Cardiovasc. Res. 37, 346-51 (1998).

J A Rall and P A Wahr
"Role of calcium and crossbridges in modulation of rates of force development and relaxation in skinned muscle fibers."
Adv. Exp. Med. Biol. 453, 219-27; discussion 227-8 (1998).

M Narayan and L J Berliner
"Mapping fatty acid binding to beta-lactoglobulin Ligand binding is restricted by modification of Cys 121."
Protein Sci. 7, 150-7 (1998).

1997

K M Cawthern, M Narayan, D Chaudhuri, E A Permyakov, and L J Berliner
"Interactions of alpha-lactalbumin with fatty acids and spin label analogs."
J. Biol. Chem. 272, 30812-6 (1997).

B Pan, C Ban, M C Wahl, and M Sundaralingam
"Crystal structure of dGCGCGCG with 5-overhang G residues."
Biophys. J. 73, 1553-61 (1997).

M Xia, P Ilich, R Dempski, and R Hille
"Recent mechanistic studies of xanthine oxidase."
Biochem. Soc. Trans. 25, 768-73 (1997).

L M Rellick and W J Becktel
"Comparison of van der Waals and semiempirical calculations of the molecular volumes of small molecules and proteins."
Biopolymers 42, 191-202 (1997).

F C Chang and R P Swenson
"Regulation of oxidation-reduction potentials through redox-linked ionization in the Y98H mutant of the Desulfovibrio vulgaris Hildenborough flavodoxin direct proton nuclear magnetic resonance spectroscopic evidence for the redox-dependent shift in the pKa of Histidine-98."
Biochemistry 36, 9013-21 (1997).

M Narayan, L J Berliner, A J Merola, P T Diaz, and T L Clanton
"Biological reactions of peroxynitrite evidence for an alternative pathway of salicylate hydroxylation."
Free Radic. Res. 27, 63-72 (1997).

P A Wahr and J A Rall
"Role of calcium and cross bridges in determining rate of force development in frog muscle fibers."
Am. J. Physiol. 272, C1664-71 (1997).

M Narayan and L J Berliner
"Fatty acids and retinoids bind independently and simultaneously to beta-lactoglobulin."
Biochemistry 36, 1906-11 (1997).

K Ratnam, N Shiraishi, W H Campbell, and R Hille
"Spectroscopic and kinetic characterization of the recombinant cytochrome c reductase fragment of nitrate reductase. Identification of the rate-limiting catalytic step."
J. Biol. Chem. 272, 2122-8 (1997).

1996

F Rajamohan, O Alzate, J A Cotrill, A Curtiss, and D H Dean
"Protein engineering of Bacillus thuringiensis delta-endotoxin: mutations at domain II of CryIAb enhance receptor affinity and toxicity toward gypsy moth larvae."
Proc. Natl. Acad. Sci. U.S.A. 93, 14338-43 (1996).

S Bian, C F Hemann, R Hille, and J A Cowan
"Characterization of an autoreduction pathway for the Fe4S43 cluster of mutant Chromatium vinosum high-potential iron proteins. Site-directed mutagenesis studies to probe the role of phenylalanine 66 in defining the stability of the Fe4S4 center provide evidence for oxidative degradation via a Fe3S4 cluster."
Biochemistry 35, 14544-52 (1996).

W L Erdahl, C J Chapman, E Wang, R W Taylor, and D R Pfeiffer
"Ionophore 4-BrA23187 transports Zn2 and Mn2 with high selectivity over Ca2."
Biochemistry 35, 13817-25 (1996).

A Soriano, D Li, S Bian, A Agarwal, and J A Cowan
"Factors influencing redox thermodynamics and electron self-exchange for the Fe4S4 cluster in Chromatium vinosum high potential iron protein the role of core aromatic residues in defining cluster redox chemistry."
Biochemistry 35, 12479-86 (1996).

C R Ingling, J P Barley, and N Ghani
"Chromatic content of spectral lights."
Vision Res. 36, 2537-51 (1996).

D C Pearson, E L Gross, and E S David
"Electrostatic properties of cytochrome f implications for docking with plastocyanin."
Biophys. J. 71, 64-76 (1996).

K Ratnam, M S Brody, and R Hille
"Purification of xanthine dehydrogenase and sulfite oxidase from chicken liver."
Prep. Biochem. Biotechnol. 26, 143-54 (1996).

1995

K Ratnam, N Shiraishi, W H Campbell, and R Hille
"Spectroscopic and kinetic characterization of the recombinant wild-type and C242S mutant of the cytochrome b reductase fragment of nitrate reductase."
J. Biol. Chem. 270, 24067-72 (1995).

M G Ryan, K Ratnam, and R Hille
"The molybdenum centers of xanthine oxidase and xanthine dehydrogenase. Determination of the spectral change associated with reduction from the MoVI to the MoIV state."
J. Biol. Chem. 270, 19209-12 (1995).

P Narayan, S A McCune, P M Robitaille, C M Hohl, and R A Altschuld
"Mechanical alternans and the force-frequency relationship in failing rat hearts."
J. Mol. Cell. Cardiol. 27, 523-30 (1995).

1994

J D Johnson, R J Nakkula, C Vasulka, and L B Smillie
"Modulation of Ca2 exchange with the Ca2-specific regulatory sites of troponin C."
J. Biol. Chem. 269, 8919-23 (1994).

R A Altschuld, D W Jung, R M Phillips, P Narayan, L C Castillo, T E Whitaker, J Hensley, C M Hohl, and G P Brierley
"Evidence against norepinephrine-stimulated efflux of mitochondrial Mg2 from intact cardiac myocytes."
Am. J. Physiol. 266, H1103-11 (1994).

1993

K Ratnam and R Hille
"Paradoxical stabilization of the neutral flavin semiquinone of xanthine dehydrogenase at high pH."
Biochem. Biophys. Res. Commun. 194, 1097-102 (1993).

R Kasturi, C Vasulka, and J D Johnson
"Ca2, caldesmon, and myosin light chain kinase exchange with calmodulin."
J. Biol. Chem. 268, 7958-64 (1993).

1992

E L Gross, J E Draheim, A S Curtiss, B Crombie, A Scheffer, B Pan, C Chiang, and A Lopez
"Thermal denaturation of plastocyanin the effect of oxidation state, reductants, and anaerobicity."
Arch. Biochem. Biophys. 298, 413-9 (1992).

1991

B T Stokes, R A Altschuld, C M Hohl, Q Li, and D K Anderson
"Energy depletion in culture. Adenine nucleotides are altered as in vivo."
Mol. Chem. Neuropathol. 15, 29-35 (1991).

1990

S R Durell, C H Lee, R T Ross, and E L Gross
"Factor analysis of the near-ultraviolet absorption spectrum of plastocyanin using bilinear, trilinear, and quadrilinear models."
Arch. Biochem. Biophys. 278, 148-60 (1990).

E L Gross, A Curtiss, S R Durell, and D White
"Chemical modification of spinach plastocyanin using 4-chloro-3,5-dinitrobenzoic acid characterization of four singly-modified forms."
Biochim. Biophys. Acta 1016, 107-14 (1990).

S R Durell, J K Labanowski, and E L Gross
"Modeling of the electrostatic potential field of plastocyanin."
Arch. Biochem. Biophys. 277, 241-54 (1990).

H Ebata, J S Mills, K Nemcek, and J D Johnson
"Calcium binding to extracellular sites of skeletal muscle calcium channels regulates dihydropyridine binding."
J. Biol. Chem. 265, 177-82 (1990).

C R Ingling and S S Grigsby
"Perceptual correlates of magnocellular and parvocellular channels seeing form and depth in afterimages."
Vision Res. 30, 823-8 (1990).

Q Li, B Biagi, C Hohl, R Starling, B Stokes, and R Altschuld
"Effects of isoproterenol and caffeine on calcium transients and action potentials in human ventricular cardiomyocytes."
Prog. Clin. Biol. Res. 327, 743-50 (1990).

1989

Q Li, Z Guan, B A Biagi, B T Stokes, and R A Altschuld
"Hyperthyroid adult rat cardiomyocytes. II. Single cell electrophysiology and free calcium transients."
Am. J. Physiol. 257, C957-63 (1989).

Q Li, C M Hohl, R A Altschuld, and B T Stokes
"Energy depletion-repletion and calcium transients in single cardiomyocytes."
Am. J. Physiol. 257, C427-34 (1989).

1988

S R Durell, E L Gross, and J E Draheim
"Analysis of the near-ultraviolet absorption and circular dichroic spectra of parsley plastocyanin for the effects of pH and copper center conformation changes."
Arch. Biochem. Biophys. 267, 217-27 (1988).

Q A Li, R A Altschuld, and B T Stokes
"Myocyte deenergization and intracellular free calcium dynamics."
Am. J. Physiol. 255, C162-8 (1988).

J S Mills, M P Walsh, K Nemcek, and J D Johnson
"Biologically active fluorescent derivatives of spinach calmodulin that report calmodulin target protein binding."
Biochemistry 27, 991-6 (1988).

1987

G P Anderson, D G Sanderson, C H Lee, S Durell, L B Anderson, and E L Gross
"The effect of ethylenediamine chemical modification of plastocyanin on the rate of cytochrome f oxidation and P-700 reduction."
Biochim. Biophys. Acta 894, 386-98 (1987).